Package: epos
Type: Package
Title: Epilepsy Ontologies' Similarities
Version: 1.2
Maintainer: Bernd Mueller <bernd.mueller@zbmed.de>
Description: Analysis and visualization of similarities between
        epilepsy ontologies based on text mining results by comparing
        ranked lists of co-occurring drug terms in the BioASQ corpus.
        The ranked result lists of neurological drug terms co-occurring
        with terms from the epilepsy ontologies EpSO, ESSO, EPILONT,
        EPISEM and FENICS undergo further analysis. The source data to
        create the ranked lists of drug names is produced using the
        text mining workflows described in Mueller, Bernd and
        Hagelstein, Alexandra (2016) <doi:10.4126/FRL01-006408558>,
        Mueller, Bernd et al. (2017)
        <doi:10.1007/978-3-319-58694-6_22>, Mueller, Bernd and
        Rebholz-Schuhmann, Dietrich (2020)
        <doi:10.1007/978-3-030-43887-6_52>, and Mueller, Bernd et al.
        (2022) <doi:10.1186/s13326-021-00258-w>.
Depends: R (>= 3.6.0)
License: LGPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
URL: https://github.com/bernd-mueller/epos
BugReports: https://github.com/bernd-mueller/epos/issues
Imports: hash, ggplot2, testthat, gridExtra, TopKLists, stringr,
        xtable, mongolite, stats, VennDiagram, cowplot
Suggests: knitr, rmarkdown
Authors@R: person(given = "Bernd",
                    family = "Mueller",
                    role = c("aut", "cre"),
                    comment = c(ORCID = "0000-0003-3062-8192"),
                    email = "bernd.mueller@zbmed.de")
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
        libsasl2-dev
Repository: https://bernd-mueller.r-universe.dev
Date/Publication: 2025-08-29 11:33:43 UTC
RemoteUrl: https://github.com/bernd-mueller/epos
RemoteRef: HEAD
RemoteSha: 8c279c3b068bf6677685f1f61fa83a10d7018b7e
NeedsCompilation: no
Packaged: 2026-10-10 13:59:45 UTC; root
Author: Bernd Mueller [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3062-8192>)